Miyakogusa Predicted Gene

Lj6g3v0938270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MRF8_SOYBN 1209 81.8 89.5 (tr|K7MRF8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G49710.1 922 62.3 77.3 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:18437845-18440010 FORWARD LENGTH=721
Medicago Medtr3g434800.1 1229 81.2 87.5 | pentatricopeptide (PPR) repeat protein | HC | chr3:11323375-11320804 | 20130731
Soybean Glyma08g41430.1 1207 81.2 89.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0938270.1 length: 729 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.35 83-110
183-208
215-244
393-418
421-450
456-484
494-517
560-588
HMMPfam PF13041 PPR_2 1.5e-10 111-159
315-364
HMMTigr TIGR00756 PPR: 0.00099 83-108
114-147
215-248
318-352
421-454
456-489
ProfileScan PS51375 PPR 5.218 112-146
81-111
213-247
180-210
248-282
316-351
419-453
388-418
352-386
454-484
490-520
556-590
522-552
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3e-09 385-577
no_ID  
HMMPanther PTHR24015 FAMILY 7e-284 66-729
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 7e-284 66-729
HMMPfam PF14432 DYW_deaminase 1.8e-13 593-719
Seg seg seg NA 7-17
superfamily SSF48452 TPR-like 5.1e-06 474-635
Wolf-PSORT
Lj6g3v0938270.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0938270.1