Miyakogusa Predicted Gene

Lj6g3v0938260.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L9V4_SOYBN 961 84.8 88.4 (tr|K7L9V4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80930.1 895 80.0 86.6 | Symbols: | MIF4G domain-containing protein / MA3 domain-containing protein | chr1:30405774-30409499 REVERSE LENGTH=900
Medicago Medtr3g434840.1 954 85.2 88.8 | pre-mRNA-splicing factor cwc22, putative | HC | chr3:11335847-11342445 | 20130731
Soybean Glyma08g41440.2 960 85.0 88.4  
LJGI gnl|LJGI|BW629935 817 99.8 99.8 similar to UniRef100_A7QDS0 Cluster: Chromosome chr15 scaffold_82, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_82, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0938260.1 length: 811 aa.
IPR003890 MIF4G-like, type 3
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0005515 protein binding    
HMMPfam PF02854 MIF4G 1.9e-29 275-457
HMMSmart SM00543 Middle 4.1e-39 274-457
IPR003891 Initiation factor eIF-4 gamma, MA3
HMMPfam PF02847 MA3 1.3e-27 566-672
HMMSmart SM00544 Domain 1.3e-37 566-672
ProfileScan PS51366 MI 24.330 565-681
IPR016021 MIF4-like, type 1/2/3
Biological Process GO:0016070 RNA metabolic process    
Gene3D G3DSA:1.25.40.180 no description 1.3e-60 241-488
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 2.7e-72 261-505
no_ID  
Coil coil coiled-coil NA 140-161
HMMPanther PTHR18034 CELL 0 5-811
HMMPanther PTHR18034:SF3 CELL 0 5-811
Seg seg seg NA 5-30
46-54
67-85
87-109
115-130
134-196
202-218
343-354
518-552
773-801
Wolf-PSORT
Lj6g3v0938260.1	nucl 9, cyto 3, chlo 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0938260.1