Miyakogusa Predicted Gene
- Lj6g3v0933470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
Q8S5C2_SOYBN |
402 |
92.4 |
95.2 |
(tr|Q8S5C2) 4-coumarate:CoA ligase isoenzyme 3 OS=Glycine max GN=Gm4CL-3 PE=2 SV=1 |
| TAIR_pep |
AT1G65060.1 |
348 |
82.2 |
91.1 |
| Symbols: 4CL3 | 4-coumarate:CoA ligase 3 | chr1:24167385-24171457 REVERSE LENGTH=561 |
| Medicago |
Medtr5g007640.1 |
393 |
91.7 |
94.2 |
| 4-coumarate:CoA ligase-like protein | HC | chr5:1444145-1450200 | 20130731 |
| Soybean |
Glyma01g44270.1 |
373 |
91.9 |
94.8 |
|
| LJGI |
gnl|LJGI|TC70657 |
1057 |
99.6 |
99.6 |
homologue to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2; n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine max (Soybean), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0933470.1 |
length: 209 aa. |
| IPR000873 |
AMP-dependent synthetase/ligase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF00501 |
AMP-binding |
2e-43 |
1-133 |
| IPR025110 |
Domain of unknown function DUF4009 |
| HMMPfam |
PF13193 |
DUF4009 |
6.2e-10 |
173-205 |
| no_ID |
|
| Gene3D |
G3DSA:2.30.38.10 |
no description |
1.4e-26 |
24-99 |
| Gene3D |
G3DSA:3.30.300.30 |
no description |
1.4e-29 |
105-207 |
| HMMPanther |
PTHR24096 |
FAMILY |
1.5e-114 |
1-208 |
| HMMPanther |
PTHR24096:SF16 |
SUBFAMILY |
1.5e-114 |
1-208 |
| superfamily |
SSF56801 |
Acetyl-CoA |
1.1e-71 |
1-205 |
- Wolf-PSORT
Lj6g3v0933470.1 cyto 8, chlo 3, cysk 1.5, chlo_mito 1.5, cysk_nucl 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0933470.1 |
|