Miyakogusa Predicted Gene

Lj6g3v0925820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IZY5_MEDTR 921 87.8 92.4 (tr|G7IZY5) Citrate synthase OS=Medicago truncatula GN=MTR_3g048920 PE=3 SV=1
TAIR_pep AT2G42790.1 806 77.1 85.5 | Symbols: CSY3 | citrate synthase 3 | chr2:17803132-17805991 REVERSE LENGTH=509
Medicago Medtr3g048920.2 921 87.8 92.4 | citrate synthase 3, peroxisomal protein | HC | chr3:18169404-18175381 | 20130731
Soybean Glyma08g42400.1 895 85.6 90.7  
LJGI gnl|LJGI|TC65923 1162 100.0 100.0 similar to UniRef100_A7PJZ1 Cluster: Citrate synthase; n=2; Vitis vinifera|Rep: Citrate synthase - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0925820.1 length: 516 aa.
IPR002020 Citrate synthase-like
method AccNumber shortName E-value location
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
FPrintScan PR00143 CITRTSNTHASE 1.5e-43 229-242
283-298
305-333
358-378
420-436
440-454
HMMPanther PTHR11739 CITRATE 2.3e-200 43-516
HMMPfam PF00285 Citrate_synt 5.5e-128 103-471
IPR016141 Citrate synthase-like, core
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
superfamily SSF48256 Citrate 7.6e-147 100-490
IPR016142 Citrate synthase-like, large alpha subdomain
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
Gene3D G3DSA:1.10.580.10 no description 2.9e-89 110-344
IPR016143 Citrate synthase-like, small alpha subdomain
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
Gene3D G3DSA:1.10.230.10 no description 5.4e-39 345-434
IPR019810 Citrate synthase active site
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
PatternScan PS00480 CITRATE_SYNTHASE NA 365-377
no_ID  
HMMPanther PTHR11739:SF0 SUBFAMILY 2.3e-200 43-516
Seg seg seg NA 4-9
226-240
Wolf-PSORT
Lj6g3v0925820.1	cyto 4, chlo 3, nucl 3, plas 1, vacu 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0925820.1