Miyakogusa Predicted Gene

Lj6g3v0920170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IXK4_MEDTR 498 96.4 98.0 (tr|G7IXK4) Vacuolar protein sorting-associated protein-like protein OS=Medicago truncatula GN=MTR_3g051210 PE=4 SV=1
TAIR_pep AT4G27040.4 453 84.8 93.6 | Symbols: VPS22 | EAP30/Vps36 family protein | chr4:13573061-13574576 REVERSE LENGTH=250
Medicago Medtr3g051210.1 498 96.4 98.0 | vacuolar sorting protein SNF8 | HC | chr3:20205015-20212262 | 20130731
Soybean Glyma08g42650.1 484 92.8 97.6  
LJGI gnl|LJGI|TC67719 714 100.0 100.0 homologue to UniRef100_A7P0T6 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0920170.1 length: 250 aa.
IPR007286 EAP30
method AccNumber shortName E-value location
HMMPanther PTHR12806 EAP30 1.7e-129 1-239
HMMPfam PF04157 EAP30 4.1e-65 6-224
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 1.1e-24 91-171
172-240
IPR016689 ESCRT-2 complex, Snf8
HMMPIR PIRSF017215 ESCRT-2 1.8e-138 1-246
no_ID  
HMMPanther PTHR12806:SF0 SUBFAMILY 1.7e-129 1-239
superfamily SSF46785 "Winged 1.9e-16 23-174
175-240
Wolf-PSORT
Lj6g3v0920170.1	chlo 8, mito 4, nucl 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0920170.1