Miyakogusa Predicted Gene

Lj6g3v0898670.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7IW53_MEDTR 495 64.2 70.8 (tr|G7IW53) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g019330 PE=4 SV=1

TAIR_pep AT1G50910.1 236 54.0 69.0 | Symbols: | unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). | chr1:18867083-18869839 REVERSE LENGTH=500

Medicago Medtr3g019330.1 515 70.5 77.8 | hypothetical protein | HC | chr3:5409555-5402156 | 20130731

Soybean Glyma02g25250.2 469 71.1 77.6

LJGI gnl|LJGI|BW626441 640 99.7 99.7 similar to UniRef100_A7PGT2 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0898670.1 length: 375 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 45-56

Wolf-PSORT

Lj6g3v0898670.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0898670.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7IW53_MEDTR	495	64.2	70.8	(tr\|G7IW53) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g019330 PE=4 SV=1
TAIR_pep	AT1G50910.1	236	54.0	69.0	\| Symbols: \| unknown protein; Has 1105 Blast hits to 802 proteins in 217 species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi - 210; Plants - 58; Viruses - 6; Other Eukaryotes - 207 (source: NCBI BLink). \| chr1:18867083-18869839 REVERSE LENGTH=500
Medicago	Medtr3g019330.1	515	70.5	77.8	\| hypothetical protein \| HC \| chr3:5409555-5402156 \| 20130731
Soybean	Glyma02g25250.2	469	71.1	77.6
LJGI	gnl\|LJGI\|BW626441	640	99.7	99.7	similar to UniRef100_A7PGT2 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)

no_ID
Lj6g3v0898670.1				length: 375 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	45-56