Miyakogusa Predicted Gene

Lj6g3v0857780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IY41_MEDTR 860 61.3 70.9 (tr|G7IY41) Bromodomain-containing protein OS=Medicago truncatula GN=MTR_3g052530 PE=4 SV=1
TAIR_pep AT5G55040.2 459 41.6 57.2 | Symbols: | DNA-binding bromodomain-containing protein | chr5:22327727-22331703 REVERSE LENGTH=916
Medicago Medtr3g052530.1 860 61.3 70.9 | DNA-binding bromodomain protein | HC | chr3:20775805-20769950 | 20130731
Soybean Glyma18g10890.1 845 65.1 72.7  
LJGI gnl|LJGI|BP038570 1122 100.0 100.0 similar to UniRef100_A7P0P0 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0857780.1 length: 860 aa.
IPR001487 Bromodomain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
FPrintScan PR00503 BROMODOMAIN 6e-15 166-179
180-196
196-214
214-233
Gene3D G3DSA:1.20.920.10 no description 5.6e-35 143-260
HMMPfam PF00439 Bromodomain 4.5e-26 156-237
HMMSmart SM00297 bromo 2e-32 144-252
ProfileScan PS50014 BROMODOMAIN_2 20.006 163-233
superfamily SSF47370 Bromodomain 3.4e-35 25-263
IPR018359 Bromodomain, conserved site
PatternScan PS00633 BROMODOMAIN_1 NA 169-225
no_ID  
HMMPanther PTHR22881 BROMODOMAIN 3e-85 7-447
HMMPanther PTHR22881:SF3 BROMODOMAIN 3e-85 7-447
Seg seg seg NA 36-65
78-91
345-358
529-543
840-854
Wolf-PSORT
Lj6g3v0857780.1	nucl 11, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0857780.1