Miyakogusa Predicted Gene

Lj6g3v0857630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MQV0_SOYBN 1267 79.0 88.8 (tr|K7MQV0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G08070.1 558 39.6 56.7 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2514374-2516599 REVERSE LENGTH=741
Medicago Medtr3g052720.1 1303 81.7 89.0 | organelle transcript processing protein, putative | HC | chr3:20868148-20864227 | 20130731
Soybean Glyma18g10770.1 1182 79.6 89.1  
LJGI gnl|LJGI|FS335876 1285 99.8 99.8 weakly similar to UniRef100_A7PRP0 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0857630.1 length: 781 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.011 153-175
181-210
448-473
549-572
HMMPfam PF13041 PPR_2 1.2e-07 240-288
372-419
477-520
HMMTigr TIGR00756 PPR: 0.0022 181-210
243-276
344-375
375-409
448-473
477-510
511-546
ProfileScan PS51375 PPR 5.568 77-112
113-147
179-213
148-178
241-275
373-407
342-372
443-473
408-442
474-508
509-544
545-575
577-607
610-645
no_ID  
HMMPanther PTHR24015 FAMILY 4.9e-287 6-781
HMMPanther PTHR24015:SF136SUBFAMILY NOT 4.9e-287 6-781
HMMPfam PF14432 DYW_deaminase 2.1e-17 654-771
Wolf-PSORT
Lj6g3v0857630.1	chlo 7, mito 3, plas 3, mito_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0857630.1