Miyakogusa Predicted Gene

Lj6g3v0831440.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N0J9_SOYBN 716 75.3 81.7 (tr|I1N0J9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G24830.1 468 54.0 67.1 | Symbols: | zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein | chr2:10576993-10579154 REVERSE LENGTH=497
Medicago Medtr3g053700.1 706 73.6 82.5 | zinc finger CCCH-type with G patch domain protein | HC | chr3:21366860-21373557 | 20130731
Soybean Glyma18g10210.1 716 75.3 81.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0831440.2 length: 495 aa.
IPR000467 G-patch domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01585 G-patch 4.4e-11 295-336
HMMSmart SM00443 glycine 2e-12 293-339
ProfileScan PS50174 G_PATCH 12.647 295-351
IPR000571 Zinc finger, CCCH-type
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50103 ZF_C3H1 13.601 142-169
no_ID  
Coil coil coiled-coil NA 11-32
45-66
361-382
424-476
HMMPanther PTHR23329 TUFTELIN-INTERACTING 5.3e-124 10-492
HMMPanther PTHR23329:SF2 ZINC 5.3e-124 10-492
Seg seg seg NA 3-26
245-267
344-367
Wolf-PSORT
Lj6g3v0831440.2	nucl 8, cyto 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0831440.2