Miyakogusa Predicted Gene

Lj6g3v0820200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKK8_MEDTR 192 93.0 96.0 (tr|I3SKK8) Uncharacterized protein OS=Medicago truncatula PE=4 SV=1
TAIR_pep AT4G26810.2 183 90.0 94.0 | Symbols: | SWIB/MDM2 domain superfamily protein | chr4:13492247-13492649 REVERSE LENGTH=106
Medicago Medtr3g054150.1 116 94.8 96.6 | SWIB/MDM2 domain protein | HC | chr3:21478240-21479690 | 20130731
Soybean Glyma08g43410.1 187 92.0 96.0  
LJGI gnl|LJGI|TC82278 579 99.0 99.0 similar to UniRef100_Q1PCH7 Cluster: SWIb domain-containing protein; n=1; Solanum chacoense|Rep: SWIb domain-containing protein - Solanum chacoense (Chaco potato), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0820200.1 length: 100 aa.
IPR003121 SWIB/MDM2 domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF02201 SWIB 4.3e-23 22-95
superfamily SSF47592 SWIB/MDM2 3e-23 11-97
IPR019835 SWIB domain
HMMSmart SM00151 SWI 3.2e-12 20-100
no_ID  
Gene3D G3DSA:1.10.245.10 no description 1.9e-21 15-98
HMMPanther PTHR13844 BRG-1 1.2e-29 15-95
HMMPanther PTHR13844:SF0 SUBFAMILY 1.2e-29 15-95
Wolf-PSORT
Lj6g3v0820200.1	nucl 8, cyto 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0820200.1