Miyakogusa Predicted Gene

Lj6g3v0820170.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SRC4_MEDTR 217 64.7 74.1 (tr|I3SRC4) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1

TAIR_pep AT4G22320.1 90.1 36.9 51.5 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). | chr4:11793129-11794596 REVERSE LENGTH=238

Medicago Medtr3g054230.1 219 64.7 74.7 | hypothetical protein | HC | chr3:21514592-21509410 | 20130731

Soybean Glyma08g43440.1 194 59.6 66.3

LJGI gnl|LJGI|TC71752 718 100.0 100.0 similar to UniRef100_A7P0J8 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0820170.1 length: 174 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 39-54
70-82

Wolf-PSORT

Lj6g3v0820170.1 chlo 5, nucl 5, mito 4

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0820170.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SRC4_MEDTR	217	64.7	74.1	(tr\|I3SRC4) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep	AT4G22320.1	90.1	36.9	51.5	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). \| chr4:11793129-11794596 REVERSE LENGTH=238
Medicago	Medtr3g054230.1	219	64.7	74.7	\| hypothetical protein \| HC \| chr3:21514592-21509410 \| 20130731
Soybean	Glyma08g43440.1	194	59.6	66.3
LJGI	gnl\|LJGI\|TC71752	718	100.0	100.0	similar to UniRef100_A7P0J8 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)

no_ID
Lj6g3v0820170.1				length: 174 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	39-54 70-82