Miyakogusa Predicted Gene

Lj6g3v0818980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N0I6_SOYBN 877 78.7 86.4 (tr|I1N0I6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G04950.3 584 55.0 69.4 | Symbols: TAFII59, TAF6, ATTAF6 | TATA BOX ASSOCIATED FACTOR II 59 | chr1:1403606-1407184 REVERSE LENGTH=549
Medicago Medtr3g055240.1 796 73.5 79.7 | TATA-binding protein associated factor | HC | chr3:21720307-21725649 | 20130731
Soybean Glyma18g10040.1 854 73.8 81.1  
LJGI gnl|LJGI|TC59725 1429 100.0 100.0 similar to UniRef100_A7P0I4 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0818980.1 length: 544 aa.
IPR004823 TATA box binding protein associated factor (TAF)
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006352 DNA-dependent transcription, initiation    
HMMPfam PF02969 TAF 2.5e-29 1-65
HMMSmart SM00803 TATA 1.8e-33 2-68
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 2.6e-28 1-65
superfamily SSF47113 Histone-fold 4.9e-15 1-67
IPR011442 Domain of unknown function DUF1546
Cellular Component GO:0005634 nucleus    
Biological Process GO:0051090 regulation of sequence-specific DNA binding transcription factor activity    
HMMPfam PF07571 DUF1546 4.1e-31 259-348
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 0.00064 208-378
no_ID  
HMMPanther PTHR10221 TRANSCRIPTION 1.5e-162 1-484
HMMPanther PTHR10221:SF7 TRANSCRIPTION 1.5e-162 1-484
Seg seg seg NA 96-107
467-481
Wolf-PSORT
Lj6g3v0818980.1	nucl 3, plas 3, golg 3, nucl_plas 3, golg_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0818980.1