Miyakogusa Predicted Gene

Lj6g3v0802310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N0D7_SOYBN 2477 86.3 91.7 (tr|I1N0D7) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G55540.1 1853 65.2 79.6 | Symbols: TRN1, LOP1 | tornado 1 | chr5:22496322-22500543 REVERSE LENGTH=1380
Medicago Medtr3g055970.1 2427 84.8 90.6 | tornado protein | HC | chr3:22234610-22229217 | 20130731
Soybean Glyma18g09100.1 2470 86.2 91.6  
LJGI gnl|LJGI|BW630243 880 98.7 98.7 similar to UniRef100_A7P0F5 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0802310.1 length: 1375 aa.
IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype
method AccNumber shortName E-value location
HMMSmart SM00368 Leucine 92 128-155
156-183
288-315
316-343
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-09 477-683
no_ID  
Coil coil coiled-coil NA 1124-1152
Gene3D G3DSA:3.40.50.300 no description 3.7e-08 485-690
Gene3D G3DSA:3.80.10.10 no description 3.3e-09 63-214
227-342
363-472
HMMPanther PTHR24106 FAMILY 3.7e-16 75-337
HMMPfam PF13516 LRR_6 0.62 288-308
Seg seg seg NA 1021-1032
1148-1161
1286-1300
superfamily SSF52047 RNI-like 6.1e-40 47-458
Wolf-PSORT
Lj6g3v0802310.1	cyto 6, nucl 5, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0802310.1