Miyakogusa Predicted Gene

Lj6g3v0781000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N0C1_SOYBN 1066 82.1 89.3 (tr|I1N0C1) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT3G13080.1 848 68.5 80.1 | Symbols: ATMRP3, MRP3, ABCC3 | multidrug resistance-associated protein 3 | chr3:4196019-4201250 REVERSE LENGTH=1514
Medicago Medtr3g056700.1 1043 80.6 88.0 | multidrug resistance protein ABC transporter family protein | HC | chr3:22737903-22744851 | 20130731
Soybean Glyma18g08870.1 1065 82.1 89.3  
LJGI gnl|LJGI|FS349782 204 82.4 82.4 similar to UniRef100_A7Q947 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0781000.1 length: 632 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 7.8e-27 115-382
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 4.6e-18 471-581
ProfileScan PS50893 ABC_TRANSPORTER_2 17.494 429-632
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 6.7e-10 456-632
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 5.1e-31 101-421
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 554-568
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 30.183 115-395
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.8e-43 408-624
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 7.3e-24 111-408
Gene3D G3DSA:3.40.50.300 no description 2.6e-57 430-625
HMMPanther PTHR24223 FAMILY 0 5-624
HMMPanther PTHR24223:SF106GTP BINDING 0 5-624
Seg seg seg NA 251-265
Wolf-PSORT
Lj6g3v0781000.1	plas 8, E.R. 3, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0781000.1