Miyakogusa Predicted Gene

Lj6g3v0776070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LRE4_SOYBN 1014 94.7 97.9 (tr|I1LRE4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G20890.1 944 89.2 95.4 | Symbols: | TCP-1/cpn60 chaperonin family protein | chr5:7087020-7089906 REVERSE LENGTH=527
Medicago Medtr7g067470.1 1002 94.1 96.8 | TCP-1/cpn60 chaperonin family protein | HC | chr7:24646105-24640462 | 20130731
Soybean Glyma12g09250.1 1014 94.7 97.9  
LJGI gnl|LJGI|TC58094 1903 96.9 96.9 homologue to UniRef100_A7NVR6 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0776070.1 length: 527 aa.
IPR002194 Chaperonin TCP-1, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
PatternScan PS00750 TCP1_1 NA 35-47
PatternScan PS00751 TCP1_2 NA 58-74
PatternScan PS00995 TCP1_3 NA 86-94
IPR002423 Chaperonin Cpn60/TCP-1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0044267 cellular protein metabolic process    
HMMPanther PTHR11353 CHAPERONIN 0 1-527
HMMPfam PF00118 Cpn60_TCP1 3.4e-141 30-518
superfamily SSF48592 GroEL 4e-84 9-520
IPR012716 T-complex protein 1, beta subunit
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006457 protein folding    
Molecular Function GO:0051082 unfolded protein binding    
HMMPanther PTHR11353:SF23 CHAPERONIN 0 1-527
HMMTigr TIGR02341 chap_CCT_beta: 2e-268 6-523
IPR017998 Chaperone tailless complex polypeptide 1 (TCP-1)
FPrintScan PR00304 TCOMPLEXTCP1 2.2e-31 32-48
56-74
86-105
367-389
401-413
IPR027409 GroEL-like apical domain
Gene3D G3DSA:3.50.7.10 no description 5e-42 208-367
superfamily SSF52029 GroEL 2.5e-47 206-372
IPR027410 TCP-1-like chaperonin intermediate domain
Gene3D G3DSA:3.30.260.10 no description 1.4e-31 368-397
IPR027413 GroEL-like equatorial domain
Gene3D G3DSA:1.10.560.10 no description 2.2e-96 398-520
no_ID  
superfamily SSF54849 GroEL-intermediate 5.9e-30 149-400
Wolf-PSORT
Lj6g3v0776070.1	cyto 7, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0776070.1