Miyakogusa Predicted Gene

Lj6g3v0775980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S9B7_LOTJA 284 74.5 75.0 (tr|I3S9B7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G13120.2 226 98.1 99.1 | Symbols: | Ribosomal protein S10p/S20e family protein | chr3:4220310-4221526 REVERSE LENGTH=191
Medicago Medtr3g058430.1 226 69.5 75.0 | 30S ribosomal protein S10 | HC | chr3:23188302-23185134 | 20130731
Soybean Glyma18g08900.2 243 72.1 74.4  
LJGI gnl|LJGI|TC57707 1172 100.0 100.0 homologue to UniRef100_A1YMX4 Cluster: 30S ribosomal protein S10-like; n=1; Brassica rapa|Rep: 30S ribosomal protein S10-like - Brassica campestris (Field mustard), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0775980.1 length: 196 aa.
IPR001848 Ribosomal protein S10
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
FPrintScan PR00971 RIBOSOMALS10 5.8e-15 99-112
134-149
155-169
HAMAP MF_00508 Ribosomal_S10 24.108 97-196
HMMPanther PTHR11700 30S 4.5e-61 86-196
HMMTigr TIGR01049 rpsJ_bact: 1.2e-39 98-195
IPR018268 Ribosomal protein S10, conserved site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00361 RIBOSOMAL_S10 NA 123-138
IPR027486 Ribosomal protein S10 domain
Gene3D G3DSA:3.30.70.600 no description 4e-40 98-196
HMMPfam PF00338 Ribosomal_S10 8.8e-36 100-196
superfamily SSF54999 Ribosomal 6.4e-34 99-196
no_ID  
HMMPanther PTHR11700:SF5 SUBFAMILY 4.5e-61 86-196
Seg seg seg NA 12-32
57-71
78-89
Wolf-PSORT
Lj6g3v0775980.1	chlo 11.5, chlo_mito 7.5, mito 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0775980.1