Miyakogusa Predicted Gene
- Lj6g3v0657710.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N058_SOYBN |
1851 |
88.9 |
94.7 |
(tr|I1N058) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G13330.1 |
1448 |
69.2 |
82.2 |
| Symbols: PA200 | proteasome activating protein 200 | chr3:4319804-4330061 REVERSE LENGTH=1816 |
| Medicago |
Medtr3g461520.2 |
1833 |
88.3 |
93.4 |
| proteasome activator complex subunit-like protein | HC | chr3:24479182-24463573 | 20130731 |
| Soybean |
Glyma18g07950.1 |
1717 |
84.3 |
89.8 |
|
| LJGI |
gnl|LJGI|TC62530 |
1215 |
98.7 |
98.7 |
similar to UniRef100_A7Q9F7 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0657710.1 |
length: 1004 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR32170 |
FAMILY |
1.2e-270 |
1-1003 |
| HMMPanther |
PTHR32170:SF0 |
SUBFAMILY |
1.2e-270 |
1-1003 |
| Seg |
seg |
seg |
NA |
9-20 |
- Wolf-PSORT
Lj6g3v0657710.1 nucl 7, E.R. 2, chlo 1, cyto 1, mito 1, plas 1, vacu 1, chlo_mito 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0657710.1 |
|