Miyakogusa Predicted Gene

Lj6g3v0647470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MQE5_SOYBN 453 70.4 74.6 (tr|K7MQE5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G12840.4 239 54.4 68.2 | Symbols: HAP2A, ATHAP2A, NF-YA1 | nuclear factor Y, subunit A1 | chr5:4051147-4052961 REVERSE LENGTH=271
Medicago Medtr3g061510.2 413 65.8 70.4 | CCAAT-binding transcription factor | HC | chr3:24533665-24529746 | 20130731
Soybean Glyma08g45030.1 440 69.4 73.3  
LJGI gnl|LJGI|GO011753 1156 98.9 98.9 similar to UniRef100_A7NZQ3 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0647470.1 length: 337 aa.
IPR001289 CCAAT-binding transcription factor, subunit B
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00616 CCAATSUBUNTB 3.7e-24 167-189
198-221
HMMPanther PTHR12632 TRANSCRIPTION 9.7e-57 109-318
HMMPfam PF02045 CBFB_NFYA 4.6e-30 165-221
HMMSmart SM00521 CCAAT-Binding 7.4e-36 163-224
ProfileScan PS51152 NFYA_HAP2_2 37.979 164-224
IPR018362 CCAAT-binding factor, conserved site
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0016602 CCAAT-binding factor complex    
PatternScan PS00686 NFYA_HAP2_1 NA 169-189
no_ID  
Seg seg seg NA 42-56
238-258
284-301
Wolf-PSORT
Lj6g3v0647470.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0647470.1