Miyakogusa Predicted Gene

Lj6g3v0635240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SD25_LOTJA 395 97.0 97.0 (tr|I3SD25) Proliferating cell nuclear antigen OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G29570.1 362 88.4 93.9 | Symbols: PCNA2, ATPCNA2 | proliferating cell nuclear antigen 2 | chr2:12650139-12651598 REVERSE LENGTH=264
Medicago Medtr3g462130.1 375 91.5 95.0 | proliferating cell nuclear antigen large form protein | HC | chr3:24779909-24776933 | 20130731
Soybean Glyma08g45120.1 387 94.0 97.0  
LJGI gnl|LJGI|TC72336 1195 100.0 100.0 homologue to UniRef100_Q9FUI4 Cluster: Proliferating cell nuclear antigen; n=1; Nicotiana benthamiana|Rep: Proliferating cell nuclear antigen - Nicotiana benthamiana, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0635240.1 length: 199 aa.
IPR000730 Proliferating cell nuclear antigen, PCNA
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006275 regulation of DNA replication    
Molecular Function GO:0030337 DNA polymerase processivity factor activity    
Cellular Component GO:0043626 PCNA complex    
FPrintScan PR00339 PCNACYCLIN 1.7e-30 43-65
136-150
174-191
HMMPanther PTHR11352 PROLIFERATING 3.3e-117 1-193
HMMTigr TIGR00590 pcna: 3.5e-91 1-192
IPR022648 Proliferating cell nuclear antigen, PCNA, N-terminal
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006275 regulation of DNA replication    
Molecular Function GO:0030337 DNA polymerase processivity factor activity    
Cellular Component GO:0043626 PCNA complex    
HMMPfam PF00705 PCNA_N 2.9e-20 1-58
IPR022649 Proliferating cell nuclear antigen, PCNA, C-terminal
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006275 regulation of DNA replication    
Molecular Function GO:0030337 DNA polymerase processivity factor activity    
Cellular Component GO:0043626 PCNA complex    
HMMPfam PF02747 PCNA_C 8.4e-67 60-187
no_ID  
Gene3D G3DSA:3.70.10.10 no description 8.6e-86 1-193
HMMPanther PTHR11352:SF0 SUBFAMILY 3.3e-117 1-193
Seg seg seg NA 189-194
superfamily SSF55979 DNA 2.4e-16 60-192
1-59
Wolf-PSORT
Lj6g3v0635240.1	nucl 8.5, cysk_nucl 5, extr 2, chlo 1, cyto 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0635240.1