Miyakogusa Predicted Gene
- Lj6g3v0597030.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LLE9_SOYBN |
408 |
81.2 |
90.4 |
(tr|I1LLE9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT3G54140.1 |
332 |
65.0 |
79.7 |
| Symbols: ATPTR1, PTR1 | peptide transporter 1 | chr3:20045885-20048154 REVERSE LENGTH=570 |
| Medicago |
Medtr3g462710.2 |
425 |
84.6 |
91.7 |
| proton-dependent oligopeptide transport family protein | HC | chr3:25075783-25072333 | 20130731 |
| Soybean |
Glyma18g07220.1 |
409 |
81.7 |
90.0 |
|
| LJGI |
gnl|LJGI|TC60542 |
1433 |
100.0 |
100.0 |
similar to UniRef100_A7NYK8 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0597030.1 |
length: 240 aa. |
| IPR000109 |
Proton-dependent oligopeptide transporter family |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005215 |
transporter activity |
|
|
| Biological Process |
GO:0006810 |
transport |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11654 |
OLIGOPEPTIDE |
9e-135 |
1-238 |
| HMMPfam |
PF00854 |
PTR2 |
3.1e-35 |
1-168 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
2.7e-06 |
3-235 |
| no_ID |
|
| HMMPanther |
PTHR11654:SF37 |
OLIGOPEPTIDE |
9e-135 |
1-238 |
| Seg |
seg |
seg |
NA |
159-171 |
- Wolf-PSORT
Lj6g3v0597030.1 cyto 3, mito 2, plas 2, extr 2, golg 2, golg_plas 2, mito_plas 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0597030.1 |
|