Miyakogusa Predicted Gene

Lj6g3v0528580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KT06_SOYBN 479 71.1 80.1 (tr|I1KT06) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G39920.1 364 58.6 70.4 | Symbols: POR, TFC C | C-CAP/cofactor C-like domain-containing protein | chr4:18515882-18516919 FORWARD LENGTH=345
Medicago Medtr8g090180.1 477 72.5 80.2 | tubulin folding cofactor C, putative | HC | chr8:37809822-37808334 | 20130731
Soybean Glyma08g14330.1 479 71.1 80.1  
LJGI gnl|LJGI|TC71844 547 99.6 99.6 similar to UniRef100_Q8L5R4 Cluster: Tubulin folding cofactor C; n=1; Arabidopsis thaliana|Rep: Tubulin folding cofactor C - Arabidopsis thaliana (Mouse-ear cress), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0528580.1 length: 353 aa.
IPR006599 CARP motif
method AccNumber shortName E-value location
HMMSmart SM00673 Domain 0.00077 208-245
246-280
IPR012945 Tubulin binding cofactor C
HMMPfam PF07986 TBCC 1.2e-38 202-318
IPR017901 C-CAP/cofactor C-like domain
ProfileScan PS51329 C_CAP_COFACTOR_C 34.661 160-320
no_ID  
HMMPanther PTHR15139 TUBULIN 1.6e-93 3-351
HMMPanther PTHR15139:SF0 SUBFAMILY 1.6e-93 3-351
Seg seg seg NA 41-60
Wolf-PSORT
Lj6g3v0528580.1	nucl 8.5, cyto_nucl 5.5, cysk 2, cyto 1.5, chlo 1, extr 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0528580.1