Miyakogusa Predicted Gene
- Lj6g3v0528520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K4J3_SOYBN |
1046 |
80.7 |
87.6 |
(tr|I1K4J3) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT5G10250.1 |
671 |
56.7 |
70.5 |
| Symbols: DOT3 | Phototropic-responsive NPH3 family protein | chr5:3217028-3219368 REVERSE LENGTH=607 |
| Medicago |
Medtr8g090220.1 |
1031 |
79.3 |
86.1 |
| phototropic-responsive NPH3 family protein | HC | chr8:37858396-37862539 | 20130731 |
| Soybean |
Glyma05g31220.1 |
1000 |
82.5 |
88.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0528520.1 |
length: 629 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50097 |
BTB |
8.917 |
54-123 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
1.3e-09 |
37-140 |
| superfamily |
SSF54695 |
POZ |
1.3e-13 |
29-155 |
| IPR027356 |
NPH3 domain |
| HMMPfam |
PF03000 |
NPH3 |
3.8e-90 |
213-487 |
| ProfileScan |
PS51649 |
NPH3 |
84.774 |
213-511 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
541-576 |
| HMMPanther |
PTHR32370 |
FAMILY |
1.3e-218 |
32-629 |
| HMMPanther |
PTHR32370:SF0 |
SUBFAMILY |
1.3e-218 |
32-629 |
| Seg |
seg |
seg |
NA |
397-404 |
- Wolf-PSORT
Lj6g3v0528520.1 nucl 12, chlo 1, cyto 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0528520.1 |
|