Miyakogusa Predicted Gene

Lj6g3v0528510.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KQY3_SOYBN 134 64.5 77.6 (tr|K7KQY3) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G39880.1 108 54.3 74.5 | Symbols: | Ribosomal protein L23/L15e family protein | chr4:18504601-18505137 FORWARD LENGTH=178
Medicago Medtr8g090225.1 119 61.0 74.3 | 50S ribosomal protein L23 | HC | chr8:37863819-37863139 | 20130731
Soybean Glyma05g31230.1 131 68.0 80.4  
LJGI gnl|LJGI|TC74504 668 100.0 100.0 weakly similar to UniRef100_Q38HS8 Cluster: Ribosomal protein L23 family protein; n=1; Solanum tuberosum|Rep: Ribosomal protein L23 family protein - Solanum tuberosum (Potato), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0528510.1 length: 111 aa.
IPR012677 Nucleotide-binding, alpha-beta plait
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.8e-17 18-83
IPR012678 Ribosomal protein L23/L15e core domain
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
superfamily SSF54189 Ribosomal 1.8e-15 1-93
IPR013025 Ribosomal protein L25/L23
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF00276 Ribosomal_L23 4.6e-15 18-83
no_ID  
HMMPanther PTHR12059 RIBOSOMAL 1.1e-21 18-100
HMMPanther PTHR12059:SF5 SUBFAMILY 1.1e-21 18-100
Wolf-PSORT
Lj6g3v0528510.1	chlo 8, extr 2, vacu 2, nucl 1, cyto 1, cyto_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0528510.1