Miyakogusa Predicted Gene

Lj6g3v0528380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JE75_MEDTR 1119 81.5 86.0 (tr|G7JE75) TBC1 domain family member OS=Medicago truncatula GN=MTR_4g115090 PE=4 SV=1
TAIR_pep AT5G52580.1 877 68.8 80.1 | Symbols: | RabGAP/TBC domain-containing protein | chr5:21338052-21342848 FORWARD LENGTH=673
Medicago Medtr4g115090.1 1119 81.5 86.0 | RabGAP/TBC domain protein | HC | chr4:47487726-47477753 | 20130731
Soybean Glyma13g22760.1 1108 82.5 86.4  
LJGI gnl|LJGI|TC63412 1576 99.9 99.9 similar to UniRef100_Q9LTF8 Cluster: Similarity to GTPase activating protein; n=1; Arabidopsis thaliana|Rep: Similarity to GTPase activating protein - Arabidopsis thaliana (Mouse-ear cress), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0528380.1 length: 657 aa.
IPR000195 Rab-GTPase-TBC domain
method AccNumber shortName E-value location
Molecular Function GO:0005097 Rab GTPase activator activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0032313 regulation of Rab GTPase activity    
HMMPfam PF00566 RabGAP-TBC 5.1e-51 360-589
HMMSmart SM00164 Domain 3.6e-59 354-592
ProfileScan PS50086 TBC_RABGAP 38.360 357-567
superfamily SSF47923 Ypt/Rab-GAP 2.1e-35 326-527
502-621
IPR021935 Domain of unknown function DUF3548
HMMPfam PF12068 DUF3548 6.1e-20 105-187
no_ID  
Gene3D G3DSA:1.10.8.270 no description 2.1e-31 351-493
HMMPanther PTHR22957 TBC1 8.6e-182 88-623
HMMPanther PTHR22957:SF34 TBC1 8.6e-182 88-623
Seg seg seg NA 8-26
31-41
202-213
Wolf-PSORT
Lj6g3v0528380.1	nucl 6, cyto 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0528380.1