Miyakogusa Predicted Gene
- Lj6g3v0528360.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JE73_MEDTR |
635 |
89.7 |
95.2 |
(tr|G7JE73) Auxin-responsive protein IAA20 OS=Medicago truncatula GN=MTR_4g115070 PE=4 SV=1 |
| TAIR_pep |
AT2G13290.2 |
514 |
72.9 |
82.4 |
| Symbols: | beta-1,4-N-acetylglucosaminyltransferase family protein | chr2:5512058-5513143 FORWARD LENGTH=361 |
| Medicago |
Medtr4g115070.1 |
639 |
85.1 |
90.4 |
| beta-1,4-N-acetylglucosaminyltransferase-like protein | HC | chr4:47454433-47451197 | 20130731 |
| Soybean |
Glyma17g12100.1 |
624 |
82.3 |
89.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0528360.1 |
length: 362 aa. |
| IPR006813 |
Glycosyl transferase, family 17 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003830 |
beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity |
|
|
| Biological Process |
GO:0006487 |
protein N-linked glycosylation |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR12224 |
BETA-1,4-MANNOSYL-GLYCOPROTEIN |
2e-147 |
19-360 |
| HMMPfam |
PF04724 |
Glyco_transf_17 |
2e-155 |
8-360 |
| no_ID |
|
| HMMPanther |
PTHR12224:SF0 |
SUBFAMILY |
2e-147 |
19-360 |
| Seg |
seg |
seg |
NA |
16-26 |
- Wolf-PSORT
Lj6g3v0528360.1 chlo 3, mito 3, chlo_mito 3, plas 2, vacu 2, E.R. 2, E.R._vacu 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0528360.1 |
|