Miyakogusa Predicted Gene
- Lj6g3v0522780.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LMQ9_SOYBN |
758 |
86.1 |
92.6 |
(tr|I1LMQ9) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G40090.1 |
655 |
74.1 |
85.5 |
| Symbols: ATATH9, ATH9 | ABC2 homolog 9 | chr2:16737685-16740303 REVERSE LENGTH=538 |
| Medicago |
Medtr3g070410.1 |
717 |
80.5 |
88.8 |
| ABC1 plant-like protein, putative | HC | chr3:31590072-31598758 | 20130731 |
| Soybean |
Glyma11g35200.1 |
743 |
81.4 |
87.6 |
|
| LJGI |
gnl|LJGI|AV777277 |
474 |
100.0 |
100.0 |
similar to UniRef100_A7Q3G1 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0522780.1 |
length: 419 aa. |
| IPR004147 |
UbiB domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03109 |
ABC1 |
1.2e-37 |
23-144 |
| IPR011009 |
Protein kinase-like domain |
| Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
| superfamily |
SSF56112 |
Protein |
3.4e-13 |
21-209 |
| no_ID |
|
| HMMPanther |
PTHR10566 |
CHAPERONE-ACTIVITY |
8.5e-118 |
3-348 |
| HMMPanther |
PTHR10566:SF10 |
ABC1 |
8.5e-118 |
3-348 |
| Seg |
seg |
seg |
NA |
66-79 |
- Wolf-PSORT
Lj6g3v0522780.1 nucl 4.5, cyto 4, nucl_plas 3.5, chlo 2, plas 1.5, E.R. 1, pero 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0522780.1 |
|