Miyakogusa Predicted Gene

Lj6g3v0521710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9RUV8_RICCO 568 91.3 96.0 (tr|B9RUV8) ATP-dependent transporter, putative OS=Ricinus communis GN=RCOM_0894930 PE=3 SV=1
TAIR_pep AT3G54540.1 551 88.6 94.0 | Symbols: ATGCN4, GCN4 | general control non-repressible 4 | chr3:20190393-20192564 FORWARD LENGTH=723
Medicago Medtr1g066620.1 553 89.3 94.6 | ABC transporter F family-like protein | HC | chr1:28620100-28617199 | 20130731
Soybean Glyma13g22700.1 552 92.3 95.7  
LJGI gnl|LJGI|TC71595 694 98.6 98.6 homologue to UniRef100_Q65CB1 Cluster: ABC transporter; n=1; Populus tremula x Populus tremuloides|Rep: ABC transporter - Populus tremula x Populus tremuloides, partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0521710.1 length: 299 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 8.5e-17 113-224
ProfileScan PS50893 ABC_TRANSPORTER_2 15.927 72-297
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.9e-11 98-274
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9e-41 36-287
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4.1e-39 70-288
HMMPanther PTHR19211 ATP-BINDING 1.8e-142 1-299
HMMPanther PTHR19211:SF14 ATP-BINDING 1.8e-142 1-299
Wolf-PSORT
Lj6g3v0521710.1	chlo 6, nucl 3, mito 3, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0521710.1