Miyakogusa Predicted Gene

Lj6g3v0497330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T625_LOTJA 390 91.4 91.4 (tr|I3T625) Ribosomal protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G27530.2 351 81.9 87.1 | Symbols: PGY1 | Ribosomal protein L1p/L10e family | chr2:11763443-11764570 REVERSE LENGTH=216
Medicago Medtr5g012930.1 374 87.6 90.5 | ribosomal protein L1p/L10e family protein | HC | chr5:4015468-4012928 | 20130731
Soybean Glyma12g31040.2 383 89.5 91.4  
LJGI gnl|LJGI|TC60981 1249 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0497330.1 length: 210 aa.
IPR002143 Ribosomal protein L1
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015934 large ribosomal subunit    
HMMPIR PIRSF002155 Ribosomal 8.2e-51 1-210
HMMPfam PF00687 Ribosomal_L1 2.4e-49 21-210
IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich
Molecular Function GO:0003735 structural constituent of ribosome    
Gene3D G3DSA:3.30.190.20 no description 6.2e-45 152-210
IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Gene3D G3DSA:3.40.50.790 no description 9.6e-41 62-151
IPR023673 Ribosomal protein L1, conserved site
PatternScan PS01199 RIBOSOMAL_L1 NA 116-135
IPR023674 Ribosomal protein L1, superfamily
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0015934 large ribosomal subunit    
superfamily SSF56808 Ribosomal 7e-67 3-210
no_ID  
HMMPanther PTHR23105 RIBOSOMAL 1.1e-125 1-210
HMMPanther PTHR23105:SF4 60S 1.1e-125 1-210
Seg seg seg NA 88-105
Wolf-PSORT
Lj6g3v0497330.1	cyto 7, chlo 3, nucl 2, cysk 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0497330.1