| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1MZ13_SOYBN | 3152 | 92.4 | 94.1 | (tr|I1MZ13) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep | AT3G11130.1 | 3015 | 87.1 | 92.1 | | Symbols: | Clathrin, heavy chain | chr3:3482575-3491667 REVERSE LENGTH=1705 |
| Medicago | Medtr3g070940.1 | 3141 | 91.7 | 93.7 | | clathrin heavy chain | HC | chr3:31838485-31851792 | 20130731 |
| Soybean | Glyma18g02960.1 | 3150 | 92.3 | 94.1 | |
| LJGI | gnl|LJGI|TC81498 | 1501 | 99.6 | 99.6 | homologue to UniRef100_A7Q3K1 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%) |
| Lj6g3v0497300.2 | length: 1702 aa. | |||
| IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| HMMPfam | PF00637 | Clathrin | 4e-32 | 558-692 702-841 851-984 994-1133 1147-1282 1289-1433 1439-1580 |
| HMMSmart | SM00299 | Clathrin | 4.1e-43 | 552-694 701-843 848-987 994-1139 1143-1284 1289-1435 1438-1597 |
| IPR001473 | Clathrin, heavy chain, propeller, N-terminal | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030130 | clathrin coat of trans-Golgi network vesicle | ||
| Cellular Component | GO:0030132 | clathrin coat of coated pit | ||
| superfamily | SSF50989 | Clathrin | 5.5e-131 | 5-344 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 3.8e-26 | 718-940 1198-1536 1537-1656 |
| IPR015348 | Clathrin, heavy chain, linker, core motif | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030130 | clathrin coat of trans-Golgi network vesicle | ||
| Cellular Component | GO:0030132 | clathrin coat of coated pit | ||
| HMMPfam | PF09268 | Clathrin-link | 8.3e-09 | 345-368 |
| IPR016024 | Armadillo-type fold | |||
| Molecular Function | GO:0005488 | binding | ||
| superfamily | SSF48371 | ARM | 7.3e-20 | 1197-1532 458-794 345-501 901-1050 1051-1196 801-944 |
| IPR016025 | Clathrin, heavy chain, linker/propeller domain | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030130 | clathrin coat of trans-Golgi network vesicle | ||
| Cellular Component | GO:0030132 | clathrin coat of coated pit | ||
| Gene3D | G3DSA:2.130.10.110 | no description | 8.3e-156 | 5-377 |
| IPR016341 | Clathrin, heavy chain | |||
| HMMPIR | PIRSF002290 | Clathrin | 0 | 3-1699 |
| IPR022365 | Clathrin, heavy chain, propeller repeat | |||
| HMMPfam | PF01394 | Clathrin_propel | 7.3e-09 | 21-56 155-198 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 1478-1499 1618-1654 |
| HMMPanther | PTHR10292 | CLATHRIN | 0 | 4-1700 |
| HMMPanther | PTHR10292:SF1 | CLATHRIN | 0 | 4-1700 |
| HMMPfam | PF13838 | Clathrin_H_link | 5.7e-29 | 370-435 |
| Seg | seg | seg | NA | 262-277 725-737 854-863 1432-1446 1468-1479 1632-1653 1660-1699 |
Lj6g3v0497300.2 chlo 6, vacu 3, plas 2, nucl 1, mito 1, extr 1, golg_plas 1, cysk_plas 1, E.R._plas 1, cyto_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v0497300.2 |