Miyakogusa Predicted Gene
- Lj6g3v0484020.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LAE9_SOYBN |
295 |
72.7 |
84.3 |
(tr|K7LAE9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G43822.1 |
183 |
45.2 |
68.5 |
| Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:17620830-17621868 FORWARD LENGTH=195 |
| Medicago |
Medtr1g103240.1 |
293 |
73.1 |
82.7 |
| PPR superfamily protein | HC | chr1:46711858-46708329 | 20130731 |
| Soybean |
Glyma08g44810.1 |
295 |
72.7 |
84.3 |
|
| LJGI |
gnl|LJGI|TC76829 |
636 |
99.7 |
99.7 |
similar to UniRef100_A7QPD7 Cluster: Chromosome chr18 scaffold_137, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_137, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0484020.1 |
length: 202 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
9-30 |
| Seg |
seg |
seg |
NA |
150-165 |
- Wolf-PSORT
Lj6g3v0484020.1 mito 5.5, cyto_mito 3.5, chlo 2, nucl 2, plas 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0484020.1 |
|