Miyakogusa Predicted Gene

Lj6g3v0468630.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP34_LOTJA 610 95.4 95.4 (tr|C0JP34) Putative basic helix-loop-helix protein BHLH26 (Fragment) OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT1G72210.1 246 45.3 58.7 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:27180066-27182268 FORWARD LENGTH=320
Medicago Medtr1g082480.1 397 63.4 74.0 | basic helix loop helix (BHLH) DNA-binding family protein | HC | chr1:36677044-36674657 | 20130731
Soybean Glyma20g37550.1 441 71.6 80.4  
LJGI gnl|LJGI|TC75292 932 99.6 99.6 similar to UniRef100_Q2HTN6 Cluster: Helix-loop-helix DNA-binding; n=1; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0468630.1 length: 314 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 4.3e-13 112-169
HMMPfam PF00010 HLH 2.6e-10 114-165
HMMSmart SM00353 helix 1.3e-09 119-170
ProfileScan PS50888 BHLH 15.421 113-164
superfamily SSF47459 HLH, 3.1e-16 111-197
no_ID  
HMMPanther PTHR32088 FAMILY 5.8e-122 9-313
HMMPanther PTHR32088:SF0 SUBFAMILY 5.8e-122 9-313
Seg seg seg NA 93-106
Wolf-PSORT
Lj6g3v0468630.1	nucl 11.5, cyto_nucl 6.5, chlo 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0468630.1