Miyakogusa Predicted Gene
- Lj6g3v0466940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MYZ6_SOYBN |
791 |
80.5 |
88.6 |
(tr|I1MYZ6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G05460.1 |
483 |
52.1 |
68.4 |
| Symbols: | Glycosyl hydrolase family 85 | chr5:1615615-1618771 FORWARD LENGTH=680 |
| Medicago |
Medtr3g071610.1 |
782 |
78.9 |
87.4 |
| cytosolic endo-beta-N-acetylglucosaminidase | HC | chr3:32159920-32153697 | 20130731 |
| Soybean |
Glyma18g02770.1 |
791 |
80.5 |
88.6 |
|
| LJGI |
gnl|LJGI|FS347391 |
769 |
100.0 |
100.0 |
similar to UniRef100_A7Q3P1 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0466940.1 |
length: 479 aa. |
| IPR005201 |
Glycoside hydrolase, family 85 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Molecular Function |
GO:0033925 |
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity |
|
|
| HMMPfam |
PF03644 |
Glyco_hydro_85 |
1.6e-61 |
1-200 |
| no_ID |
|
| HMMPanther |
PTHR13246 |
ENDO |
9.6e-89 |
1-347 |
| HMMPanther |
PTHR13246:SF0 |
SUBFAMILY |
9.6e-89 |
1-347 |
- Wolf-PSORT
Lj6g3v0466940.1 chlo 7, cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0466940.1 |
|