Miyakogusa Predicted Gene
- Lj6g3v0452250.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J2E8_MEDTR |
576 |
87.8 |
92.3 |
(tr|G7J2E8) Chloroplast lumen common protein family OS=Medicago truncatula GN=MTR_3g071970 PE=4 SV=1 |
| TAIR_pep |
AT2G40400.2 |
500 |
73.5 |
87.5 |
| Symbols: | Protein of unknown function (DUF399 and DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735 |
| Medicago |
Medtr3g071970.1 |
576 |
87.8 |
92.3 |
| DUF399 family protein | HC | chr3:32330169-32336859 | 20130731 |
| Soybean |
Glyma11g35750.1 |
569 |
87.5 |
92.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0452250.1 |
length: 312 aa. |
| IPR007314 |
Domain of unknown function DUF399 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04187 |
DUF399 |
4.7e-36 |
2-217 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
27-48 |
| HMMPanther |
PTHR31620 |
FAMILY |
7.8e-111 |
1-312 |
| HMMPanther |
PTHR31620:SF0 |
SUBFAMILY |
7.8e-111 |
1-312 |
| Seg |
seg |
seg |
NA |
132-143 |
- Wolf-PSORT
Lj6g3v0452250.1 chlo 5, cyto 5, pero 2, nucl 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0452250.1 |
|