Miyakogusa Predicted Gene
- Lj6g3v0450080.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J2Y2_MEDTR |
423 |
79.0 |
88.6 |
(tr|G7J2Y2) Speckle-type POZ protein-like protein OS=Medicago truncatula GN=MTR_3g072160 PE=4 SV=1 |
| TAIR_pep |
AT3G56230.1 |
252 |
46.8 |
66.4 |
| Symbols: | BTB/POZ domain-containing protein | chr3:20860899-20862135 REVERSE LENGTH=282 |
| Medicago |
Medtr3g072160.1 |
423 |
79.0 |
88.6 |
| BTB/POZ domain protein | HC | chr3:32417889-32416327 | 20130731 |
| Soybean |
Glyma11g35860.1 |
410 |
76.5 |
84.2 |
|
| LJGI |
gnl|LJGI|AV427405 |
777 |
100.0 |
100.0 |
weakly similar to UniRef100_A7Q3S6 Cluster: Chromosome chr13 scaffold_48, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_48, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0450080.1 |
length: 275 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00225 |
Broad-Complex, |
9e-19 |
100-203 |
| ProfileScan |
PS50097 |
BTB |
16.569 |
100-171 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
1.2e-21 |
85-203 |
| superfamily |
SSF54695 |
POZ |
2.4e-21 |
72-203 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
1.3e-20 |
95-202 |
| no_ID |
|
| HMMPanther |
PTHR26379 |
FAMILY |
7.4e-24 |
28-258 |
| HMMPanther |
PTHR26379:SF81 |
SUBFAMILY |
7.4e-24 |
28-258 |
- Wolf-PSORT
Lj6g3v0450080.1 nucl 5, chlo 4, cyto 2, mito 1, plas 1, pero 1, mito_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0450080.1 |
|