Miyakogusa Predicted Gene
- Lj6g3v0437540.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MF12_SOYBN |
122 |
55.4 |
68.5 |
(tr|I1MF12) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G05475.1 |
103 |
64.5 |
81.6 |
| Symbols: | RNI-like superfamily protein | chr4:2765962-2767957 REVERSE LENGTH=309 |
| Medicago |
Medtr2g018910.1 |
108 |
57.9 |
72.6 |
| F-box/LRR protein | HC | chr2:6040628-6044118 | 20130731 |
| Soybean |
Glyma15g09890.1 |
122 |
55.4 |
68.5 |
|
| LJGI |
gnl|LJGI|TC80874 |
347 |
92.2 |
92.2 |
weakly similar to UniRef100_O82023 Cluster: N7 protein; n=1; Medicago truncatula|Rep: N7 protein - Medicago truncatula (Barrel medic), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0437540.1 |
length: 136 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
7.2e-09 |
12-80 |
| HMMPanther |
PTHR23125 |
F-BOX/LEUCINE |
6.1e-24 |
7-81 |
| HMMPanther |
PTHR23125:SF23 |
N7-RELATED |
6.1e-24 |
7-81 |
| superfamily |
SSF52047 |
RNI-like |
3.4e-06 |
4-60 |
- Wolf-PSORT
Lj6g3v0437540.1 cyto 5, chlo 3, nucl 3, extr 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0437540.1 |
|