Miyakogusa Predicted Gene

Lj6g3v0436140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LME4_SOYBN 1877 90.3 94.1 (tr|I1LME4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G03380.1 1555 76.0 84.5 | Symbols: DegP7 | DegP protease 7 | chr3:799720-808319 FORWARD LENGTH=1097
Medicago Medtr3g067690.1 1840 88.3 92.8 | DegP protease-like protein | HC | chr3:30299877-30316887 | 20130731
Soybean Glyma11g33880.1 1877 90.3 94.1  
LJGI gnl|LJGI|TC82236 1600 98.7 98.7 similar to UniRef100_Q8RY22 Cluster: Protease Do-like 7; n=1; Arabidopsis thaliana|Rep: Protease Do-like 7 - Arabidopsis thaliana (Mouse-ear cress), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0436140.1 length: 1013 aa.
IPR001478 PDZ domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00595 PDZ 1.9e-05 178-241
HMMSmart SM00228 Domain 0.34 178-257
779-864
900-969
ProfileScan PS50106 PDZ 8.989 167-257
superfamily SSF50156 PDZ 3.5e-08 883-978
157-263
760-871
IPR009003 Trypsin-like cysteine/serine peptidase domain
Molecular Function GO:0003824 catalytic activity    
superfamily SSF50494 Trypsin-like 1.4e-13 1-146
505-747
IPR025926 PDZ-like domain
HMMPfam PF12812 PDZ_1 9.4e-08 271-344
881-957
no_ID  
Gene3D G3DSA:2.30.42.10 no description 9.8e-11 202-277
804-888
910-978
Gene3D G3DSA:2.40.10.10 no description 4.8e-09 43-147
HMMPanther PTHR22939 SERINE 0 156-1007
HMMPanther PTHR22939:SF15 SUBFAMILY 0 156-1007
Seg seg seg NA 97-106
122-128
Wolf-PSORT
Lj6g3v0436140.1	cyto 5, nucl 3, cyto_plas 3, chlo 2, E.R. 2, cysk_nucl 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0436140.1