Miyakogusa Predicted Gene

Lj6g3v0410450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL O04181_LOTJA 406 99.5 99.5 (tr|O04181) Krm protein (Fragment) OS=Lotus japonicus GN=krm PE=4 SV=1
TAIR_pep AT5G37590.1 241 59.3 71.8 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:14927403-14932709 REVERSE LENGTH=551
Medicago Medtr3g065220.1 344 68.8 82.3 | TPR repeat protein | HC | chr3:29428230-29417062 | 20130731
Soybean Glyma18g04680.1 359 75.5 85.2  
LJGI gnl|LJGI|TC81618 1162 99.7 99.7 UniRef100_O04181 Cluster: Krm protein; n=1; Lotus japonicus|Rep: Krm protein - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0410450.1 length: 234 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.8e-14 120-230
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 10.709 158-234
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 3.5 116-149
158-191
200-233
no_ID  
HMMPanther PTHR19959 KINESIN 1.5e-22 123-228
HMMPfam PF13424 TPR_12 1.1e-16 155-230
superfamily SSF48452 TPR-like 3.2e-14 102-229
Wolf-PSORT
Lj6g3v0410450.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0410450.1