Miyakogusa Predicted Gene

Lj6g3v0408370.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LMA2_SOYBN 576 68.6 82.6 (tr|I1LMA2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G37490.1 352 46.7 65.5 | Symbols: | ARM repeat superfamily protein | chr5:14887744-14889051 FORWARD LENGTH=435
Medicago Medtr5g077510.1 544 64.4 77.8 | Avr9/Cf-9 rapidly elicited protein | HC | chr5:33088722-33090476 | 20130731
Soybean Glyma11g33450.1 576 68.6 82.6  
LJGI gnl|LJGI|TC65268 1828 100.0 100.0 similar to UniRef100_Q8S8Z6 Cluster: Syringolide-induced protein 13-1-1; n=1; Glycine max|Rep: Syringolide-induced protein 13-1-1 - Glycine max (Soybean), partial (47%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0408370.1 length: 425 aa.
IPR003613 U box domain
method AccNumber shortName E-value location
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2.7e-22 32-103
HMMSmart SM00504 Modified 1.2e-31 35-98
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.5e-09 156-409
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.4e-31 32-102
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 9.6e-14 112-420
no_ID  
HMMPanther PTHR22849 WDSAM1 2.8e-51 4-411
superfamily SSF57850 RING/U-box 5.2e-30 14-111
Wolf-PSORT
Lj6g3v0408370.1	mito 8.5, chlo_mito 7, chlo 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0408370.1