Miyakogusa Predicted Gene

Lj6g3v0352670.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LLY6_SOYBN 871 78.2 81.9 (tr|I1LLY6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G55150.1 327 43.5 63.4 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr1:20574634-20577141 FORWARD LENGTH=501
Medicago Medtr3g467550.1 867 77.7 81.9 | DEAD-box ATP-dependent RNA helicase | HC | chr3:27857732-27867387 | 20130731
Soybean Glyma11g31380.1 871 78.2 81.9  
LJGI gnl|LJGI|TC64465 1049 100.0 100.0 similar to UniRef100_Q9LKL6 Cluster: DEAD box protein P68; n=1; Pisum sativum|Rep: DEAD box protein P68 - Pisum sativum (Garden pea), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0352670.1 length: 545 aa.
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00039 DEAD_ATP_HELICASE NA 262-270
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2e-23 386-448
HMMSmart SM00490 helicase 5.8e-26 376-448
ProfileScan PS51194 HELICASE_CTER 19.512 340-489
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1.8e-51 133-304
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 3e-66 128-331
ProfileScan PS51192 HELICASE_ATP_BIND_1 34.848 140-316
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.097 109-137
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-48 89-319
254-470
no_ID  
Coil coil coiled-coil NA 489-510
Gene3D G3DSA:3.40.50.300 no description 2.1e-42 102-320
321-472
HMMPanther PTHR24031 FAMILY 2.1e-173 57-472
Seg seg seg NA 10-27
39-54
487-503
Wolf-PSORT
Lj6g3v0352670.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0352670.1