Miyakogusa Predicted Gene
- Lj6g3v0291960.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LN36_SOYBN |
318 |
83.7 |
89.7 |
(tr|I1LN36) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G23790.1 |
266 |
66.5 |
83.2 |
| Symbols: AAE16 | AMP-dependent synthetase and ligase family protein | chr3:8575268-8581001 FORWARD LENGTH=722 |
| Medicago |
Medtr3g084450.2 |
312 |
82.1 |
88.6 |
| long-chain-fatty-acid CoA ligase (AMP-forming) | HC | chr3:38122541-38117442 | 20130731 |
| Soybean |
Glyma11g36690.1 |
312 |
83.2 |
89.2 |
|
| LJGI |
gnl|LJGI|TC67949 |
930 |
100.0 |
100.0 |
similar to UniRef100_A7PZY2 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v0291960.1 |
length: 184 aa. |
| IPR000873 |
AMP-dependent synthetase/ligase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| HMMPfam |
PF00501 |
AMP-binding |
1.7e-19 |
1-83 |
| no_ID |
|
| Gene3D |
G3DSA:2.30.38.10 |
no description |
9e-08 |
1-29 |
| Gene3D |
G3DSA:3.30.300.30 |
no description |
3.2e-09 |
53-174 |
| HMMPanther |
PTHR24096 |
FAMILY |
4.4e-77 |
1-184 |
| HMMPanther |
PTHR24096:SF51 |
SUBFAMILY |
4.4e-77 |
1-184 |
| Seg |
seg |
seg |
NA |
110-120 |
| superfamily |
SSF56801 |
Acetyl-CoA |
6.8e-32 |
1-183 |
- Wolf-PSORT
Lj6g3v0291960.1 cyto 6.5, cyto_nucl 4.5, chlo 3, mito_plas 2, nucl 1.5, mito 1.5, plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v0291960.1 |
|