Miyakogusa Predicted Gene

Lj6g3v0291950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LN35_SOYBN 1103 85.0 92.6 (tr|I1LN35) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G14050.1 827 67.0 79.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:8103645-8105483 REVERSE LENGTH=612
Medicago Medtr3g084440.1 1065 83.7 90.9 | pentatricopeptide (PPR) repeat protein | HC | chr3:38114703-38117150 | 20130731
Soybean Glyma11g36680.1 1100 85.1 92.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0291950.1 length: 614 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00011 45-65
176-200
208-237
HMMPfam PF13041 PPR_2 2e-11 306-354
HMMPfam PF13812 PPR_3 0.0067 380-405
HMMTigr TIGR00756 PPR: 0.00025 176-200
208-237
281-309
309-343
344-378
ProfileScan PS51375 PPR 6.423 71-105
40-70
174-208
143-173
106-142
209-239
307-341
276-306
241-275
342-377
378-412
444-478
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.8e-05 304-460
no_ID  
HMMPanther PTHR24015 FAMILY 0 13-614
HMMPanther PTHR24015:SF111SUBFAMILY NOT 0 13-614
HMMPfam PF14432 DYW_deaminase 2e-16 490-604
Wolf-PSORT
Lj6g3v0291950.1	mito 8.5, chlo_mito 6.5, chlo 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0291950.1