Miyakogusa Predicted Gene

Lj6g3v0248690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MYA5_SOYBN 862 77.4 84.0 (tr|I1MYA5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G31970.1 813 70.9 82.0 | Symbols: RAD50, ATRAD50 | DNA repair-recombination protein (RAD50) | chr2:13600657-13608815 FORWARD LENGTH=1316
Medicago Medtr3g084300.1 802 72.7 82.1 | DNA repair protein RAD50 | HC | chr3:38052903-38067117 | 20130731
Soybean Glyma18g00530.1 862 77.4 84.0  
LJGI gnl|LJGI|FS344880 137 82.2 82.2 similar to UniRef100_A7Q735 Cluster: Chromosome chr5 scaffold_58, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_58, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0248690.1 length: 561 aa.
IPR004584 DNA repair protein Rad50
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006281 DNA repair    
Cellular Component GO:0030870 Mre11 complex    
HMMPanther PTHR18867 RAD50 4.9e-208 2-560
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-21 2-498
no_ID  
Coil coil coiled-coil NA 197-218
221-270
284-344
405-426
538-559
Gene3D G3DSA:3.40.50.300 no description 2.1e-16 6-167
HMMPanther PTHR18867:SF11 RAD50 4.9e-208 2-560
HMMPfam PF13476 AAA_23 4.2e-28 7-246
Seg seg seg NA 295-307
407-417
Wolf-PSORT
Lj6g3v0248690.1	cyto 8, nucl 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0248690.1