Miyakogusa Predicted Gene

Lj6g3v0227420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S932_LOTJA 322 83.0 83.0 (tr|I3S932) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G32990.1 261 88.7 95.8 | Symbols: PRPL11 | plastid ribosomal protein l11 | chr1:11955827-11957139 FORWARD LENGTH=222
Medicago Medtr3g080800.1 273 93.0 97.9 | 50S ribosomal protein L11P | HC | chr3:36570966-36568277 | 20130731
Soybean Glyma01g40920.1 280 75.6 78.7  
LJGI gnl|LJGI|TC80426 1227 100.0 100.0 similar to UniRef100_P31164 Cluster: 50S ribosomal protein L11, chloroplast precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal protein L11, chloroplast precursor - Spinacia oleracea (Spinach), partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0227420.1 length: 223 aa.
IPR000911 Ribosomal protein L11
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR11661 60S 2e-69 18-223
HMMSmart SM00649 Ribosomal 9.7e-83 79-210
IPR006519 Ribosomal protein L11, bacterial-type
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMTigr TIGR01632 L11_bact: 2.3e-63 73-210
IPR020783 Ribosomal protein L11, C-terminal
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:1.10.10.250 no description 4e-29 142-210
HMMPfam PF00298 Ribosomal_L11 7.7e-29 141-209
superfamily SSF46906 Ribosomal 4.4e-27 137-210
IPR020784 Ribosomal protein L11, N-terminal
Gene3D G3DSA:3.30.1550.10 no description 4.6e-36 72-141
HMMPfam PF03946 Ribosomal_L11_N 5.2e-29 78-136
superfamily SSF54747 Ribosomal 7.6e-31 61-154
IPR020785 Ribosomal protein L11, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00359 RIBOSOMAL_L11 NA 196-210
no_ID  
BlastProDom PD001367 RK11_SPIOL_P31164; 7e-15 106-143
Seg seg seg NA 3-23
41-56
61-77
Wolf-PSORT
Lj6g3v0227420.1	chlo 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0227420.1