Miyakogusa Predicted Gene

Lj6g3v0217180.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3ST56_LOTJA 607 93.2 93.2 (tr|I3ST56) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT2G04360.1 343 65.2 77.5 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:1519645-1521030 REVERSE LENGTH=320

Medicago Medtr3g082680.1 415 64.1 74.5 | transmembrane protein, putative | HC | chr3:37307120-37304617 | 20130731

Soybean Glyma13g11710.1 466 70.4 78.9

LJGI gnl|LJGI|TC71179 1939 100.0 100.0 similar to UniRef100_A7Q2X8 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0217180.1 length: 324 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 33-44
124-131

Wolf-PSORT

Lj6g3v0217180.1 chlo 9, mito 3, nucl 1, plas 1, nucl_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0217180.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3ST56_LOTJA	607	93.2	93.2	(tr\|I3ST56) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT2G04360.1	343	65.2	77.5	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). \| chr2:1519645-1521030 REVERSE LENGTH=320
Medicago	Medtr3g082680.1	415	64.1	74.5	\| transmembrane protein, putative \| HC \| chr3:37307120-37304617 \| 20130731
Soybean	Glyma13g11710.1	466	70.4	78.9
LJGI	gnl\|LJGI\|TC71179	1939	100.0	100.0	similar to UniRef100_A7Q2X8 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)

no_ID
Lj6g3v0217180.1				length: 324 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	33-44 124-131