Miyakogusa Predicted Gene

Lj6g3v0214780.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7J8V4_MEDTR 1228 83.8 89.3 (tr|G7J8V4) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g082750 PE=4 SV=1

TAIR_pep AT3G07700.2 1032 72.0 81.5 | Symbols: | Protein kinase superfamily protein | chr3:2459696-2463241 REVERSE LENGTH=695

Medicago Medtr3g082750.2 1228 83.8 89.3 | unusual kinase, putative | HC | chr3:37349091-37342036 | 20130731

Soybean Glyma13g11270.1 1214 83.6 89.1

LJGI gnl|LJGI|TC78693 1170 100.0 100.0 similar to UniRef100_Q93ZL4 Cluster: At3g07700/F17A17.4; n=1; Arabidopsis thaliana|Rep: At3g07700/F17A17.4 - Arabidopsis thaliana (Mouse-ear cress), partial (28%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v0214780.1 length: 708 aa.

IPR004147 UbiB domain

method AccNumber shortName E-value location

HMMPfam PF03109 ABC1 6.3e-38 259-378

IPR011009 Protein kinase-like domain

Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups

superfamily SSF56112 Protein 5.6e-15 247-457

no_ID

HMMPanther PTHR10566 CHAPERONE-ACTIVITY 1.5e-304 43-708

HMMPanther PTHR10566:SF26 SUBFAMILY 1.5e-304 43-708

Seg seg seg NA 131-143
658-673

Wolf-PSORT

Lj6g3v0214780.1 cyto 6, nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v0214780.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7J8V4_MEDTR	1228	83.8	89.3	(tr\|G7J8V4) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g082750 PE=4 SV=1
TAIR_pep	AT3G07700.2	1032	72.0	81.5	\| Symbols: \| Protein kinase superfamily protein \| chr3:2459696-2463241 REVERSE LENGTH=695
Medicago	Medtr3g082750.2	1228	83.8	89.3	\| unusual kinase, putative \| HC \| chr3:37349091-37342036 \| 20130731
Soybean	Glyma13g11270.1	1214	83.6	89.1
LJGI	gnl\|LJGI\|TC78693	1170	100.0	100.0	similar to UniRef100_Q93ZL4 Cluster: At3g07700/F17A17.4; n=1; Arabidopsis thaliana\|Rep: At3g07700/F17A17.4 - Arabidopsis thaliana (Mouse-ear cress), partial (28%)

IPR004147	UbiB domain
Lj6g3v0214780.1				length: 708 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF03109	ABC1	6.3e-38	259-378
IPR011009	Protein kinase-like domain
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups
superfamily	SSF56112	Protein	5.6e-15	247-457
no_ID
HMMPanther	PTHR10566	CHAPERONE-ACTIVITY	1.5e-304	43-708
HMMPanther	PTHR10566:SF26	SUBFAMILY	1.5e-304	43-708
Seg	seg	seg	NA	131-143 658-673