Miyakogusa Predicted Gene

Lj6g3v0214740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LYC1_SOYBN 880 78.2 83.6 (tr|K7LYC1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G07740.1 579 55.8 69.6 | Symbols: ADA2A, ATADA2A, HAC10, HXA02, HXA2 | homolog of yeast ADA2 2A | chr3:2470014-2473062 REVERSE LENGTH=548
Medicago Medtr3g082790.1 795 72.7 82.3 | transcriptional adapter ADA2a | HC | chr3:37372759-37365661 | 20130731
Soybean Glyma13g11200.1 624 69.4 75.3  
LJGI gnl|LJGI|TC58613 1491 100.0 100.0 similar to UniRef100_A7R4U9 Cluster: Chromosome undetermined scaffold_783, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_783, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0214740.1 length: 547 aa.
IPR000433 Zinc finger, ZZ-type
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00569 ZZ 1.6e-08 46-86
HMMSmart SM00291 Zinc-binding 4e-10 42-87
PatternScan PS01357 ZF_ZZ_1 NA 48-75
ProfileScan PS50135 ZF_ZZ_2 10.486 46-89
IPR001005 SANT/Myb domain
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 5.4e-09 106-146
HMMSmart SM00717 SANT 6.2e-11 102-151
IPR007526 SWIRM domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50934 SWIRM 10.148 464-547
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 7.1e-07 106-148
superfamily SSF46689 Homeodomain-like 3.3e-13 451-545
98-154
IPR016827 Transcriptional adaptor 2
HMMPIR PIRSF025024 Transcriptional 2.1e-202 1-547
IPR017884 SANT domain
ProfileScan PS51293 SANT 21.044 101-153
no_ID  
HMMPanther PTHR12374 TRANSCRIPTIONAL 6.3e-249 27-545
HMMPanther PTHR12374:SF13 TRANSCRIPTIONAL 6.3e-249 27-545
Wolf-PSORT
Lj6g3v0214740.1	nucl 10, mito 2, chlo 1, cyto 1, cyto_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0214740.1