| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LIT2_SOYBN | 205 | 52.6 | 67.3 | (tr|K7LIT2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G33270.1 | 104 | 54.7 | 70.9 | | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457 |
| Medicago | Medtr2g060710.1 | 200 | 50.0 | 65.7 | | transducin/WD40 repeat protein | HC | chr2:25747612-25744900 | 20130731 |
| Soybean | Glyma02g09620.1 | 168 | 53.7 | 70.3 | |
| LJGI | gnl|LJGI|FS330543 | 323 | 87.3 | 87.3 | similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%) |
| Lj6g3v0157220.1 | length: 234 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 0.0002 | 99-126 174-206 |
| HMMSmart | SM00320 | WD40 | 0.0016 | 86-126 167-206 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 12.747 | 174-207 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.1e-19 | 73-208 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 12.209 | 94-215 |
| superfamily | SSF50978 | WD40 | 4.6e-20 | 66-207 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 193-207 |
| no_ID | ||||
| HMMPanther | PTHR19918 | CELL | 1.8e-35 | 133-234 |
| HMMPanther | PTHR19918:SF0 | SUBFAMILY | 1.8e-35 | 133-234 |
Lj6g3v0157220.1 mito 8, chlo 4, cyto_mito 4, mito_plas 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj6g3v0157220.1 |