database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | K7LIT2_SOYBN | 650 | 73.7 | 85.2 | (tr|K7LIT2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT4G33260.1 | 342 | 42.5 | 63.6 | | Symbols: CDC20.2 | Transducin family protein / WD-40 repeat family protein | chr4:16041233-16043180 REVERSE LENGTH=447 |
Medicago | Medtr2g060710.1 | 641 | 72.1 | 85.4 | | transducin/WD40 repeat protein | HC | chr2:25747612-25744900 | 20130731 |
Soybean | Glyma10g22670.1 | 496 | 75.0 | 85.1 | |
LJGI | gnl|LJGI|TC59011 | 692 | 96.5 | 96.5 | similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%) |
Lj6g3v0156180.3 | length: 418 aa. | |||
IPR001680 | WD40 repeat | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
HMMPfam | PF00400 | WD40 | 0.00011 | 176-207 219-254 264-302 359-391 |
HMMSmart | SM00320 | WD40 | 0.00033 | 131-171 174-211 215-254 260-302 305-349 352-391 |
ProfileScan | PS50082 | WD_REPEATS_2 | 12.881 | 147-180 222-254 359-392 |
IPR015943 | WD40/YVTN repeat-like-containing domain | |||
Molecular Function | GO:0005515 | protein binding | ||
Gene3D | G3DSA:2.130.10.10 | no description | 8.8e-56 | 123-394 |
IPR017986 | WD40-repeat-containing domain | |||
Molecular Function | GO:0005515 | protein binding | ||
ProfileScan | PS50294 | WD_REPEATS_REGION | 32.298 | 139-400 |
superfamily | SSF50978 | WD40 | 4.7e-60 | 113-391 |
IPR019775 | WD40 repeat, conserved site | |||
PatternScan | PS00678 | WD_REPEATS_1 | NA | 241-255 289-303 378-392 |
no_ID | ||||
HMMPanther | PTHR19918 | CELL | 8.2e-152 | 84-418 |
HMMPanther | PTHR19918:SF0 | SUBFAMILY | 8.2e-152 | 84-418 |
Lj6g3v0156180.3 nucl 5, cyto 5, cyto_nucl 5
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj6g3v0156180.3 |