Miyakogusa Predicted Gene

Lj6g3v0156180.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LIT2_SOYBN 113 80.3 89.4 (tr|K7LIT2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G33270.1 63.9 60.9 73.9 | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457
Medicago Medtr2g060710.1 105 77.3 81.8 | transducin/WD40 repeat protein | HC | chr2:25747612-25744900 | 20130731
Soybean Glyma02g09620.1 100 80.0 88.3  
LJGI gnl|LJGI|TC80864 280 99.3 99.3 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0156180.2 length: 66 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 3.4e-06 7-39
ProfileScan PS50082 WD_REPEATS_2 12.881 7-40
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.1e-06 7-41
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 11.682 7-48
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 26-40
no_ID  
HMMPanther PTHR19918 CELL 1e-17 1-66
HMMPanther PTHR19918:SF0 SUBFAMILY 1e-17 1-66
Wolf-PSORT
Lj6g3v0156180.2	chlo 4, nucl 3, mito 3, cyto 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0156180.2