Miyakogusa Predicted Gene

Lj6g3v0098580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B8BHK6_ORYSI 297 96.5 100.0 (tr|B8BHK6) Uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34094 PE=4 SV=1
TAIR_pep AT5G08290.1 295 97.9 100.0 | Symbols: YLS8 | mRNA splicing factor, thioredoxin-like U5 snRNP | chr5:2666043-2666936 FORWARD LENGTH=142
Medicago Medtr1g045900.1 297 98.6 100.0 | mRNA splicing factor, thioredoxin-like U5 snRNP protein | HC | chr1:17280905-17278305 | 20130731
Soybean Glyma19g28850.1 296 97.9 100.0  
LJGI gnl|LJGI|TC65667 850 100.0 100.0 homologue to UniRef100_A7NWV6 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=2; core eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v0098580.1 length: 142 aa.
IPR004123 mRNA splicing factor, thioredoxin-like U5 snRNP
method AccNumber shortName E-value location
Cellular Component GO:0005681 spliceosomal complex    
Biological Process GO:0007067 mitosis    
HMMPIR PIRSF017199 Thioredoxin-like 5e-105 1-142
HMMPanther PTHR12052 THIOREDOXIN-LIKE 1.7e-118 2-142
HMMPfam PF02966 DIM1 5.2e-69 4-136
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 1.5e-84 1-142
superfamily SSF52833 Thioredoxin-like 5.4e-40 2-138
Wolf-PSORT
Lj6g3v0098580.1	cyto 7, cysk 3, chlo 1, nucl 1, extr 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v0098580.1